SNPs in Entire Mitochondrial Genome Sequences (≈15.4 kb) and cox1 Sequences (≈486 bp) Resolve Body and Head Lice From Doubly Infected People From Ethiopia, China, Nepal, and Iran But Not France.
Identifieur interne : 003524 ( Main/Exploration ); précédent : 003523; suivant : 003525SNPs in Entire Mitochondrial Genome Sequences (≈15.4 kb) and cox1 Sequences (≈486 bp) Resolve Body and Head Lice From Doubly Infected People From Ethiopia, China, Nepal, and Iran But Not France.
Auteurs : H. Xiong [Australie] ; D. Campelo [Australie] ; A. Boutellis [France] ; D. Raoult [France] ; M. Alem [Éthiopie] ; J. Ali [Éthiopie] ; K. Bilcha [Éthiopie] ; R. Shao [Australie] ; R J Pollack [États-Unis] ; S C Barker [Australie]Source :
- Journal of medical entomology [ 0022-2585 ] ; 2014.
Descripteurs français
- KwdFr :
- MESH :
- génétique : Pediculus.
- Animaux, Asie, France, Génome mitochondrial, Humains, Polymorphisme de nucléotide simple, Éthiopie.
English descriptors
- KwdEn :
- MESH :
- genetics : Pediculus.
- Animals, Asia, Ethiopia, France, Genome, Mitochondrial, Humans, Polymorphism, Single Nucleotide.
Abstract
Some people host lice on the clothing as well as the head. Whether body lice and head lice are distinct species or merely variants of the same species remains contentious. We sought to ascertain the extent to which lice from these different habitats might interbreed on doubly infected people by comparing their entire mitochondrial genome sequences. Toward this end, we analyzed two sets of published genetic data from double-infections of body lice and head lice: 1) entire mitochondrial coding regions (≈15.4 kb) from body lice and head lice from seven doubly infected people from Ethiopia, China, and France; and 2) part of the cox1 gene (≈486 bp) from body lice and head lice from a further nine doubly infected people from China, Nepal, and Iran. These mitochondrial data, from 65 lice, revealed extraordinary variation in the number of single nucleotide polymorphisms between the individual body lice and individual head lice of double-infections: from 1.096 kb of 15.4 kb (7.6%) to 2 bps of 15.4 kb (0.01%). We detected coinfections of lice of Clades A and C on the scalp hair of three of the eight people from Nepal: one person of the two people from Kathmandu and two of the six people from Pokhara. Lice of Clades A and B coinfected the scalp hair of one person from Atherton, Far North Queensland, Australia. These findings argue for additional large-scale studies of the body lice and head lice of double-infected people.
DOI: 10.1603/ME14001
PubMed: 26309307
Affiliations:
- Australie, France, États-Unis, Éthiopie
- Massachusetts, Provence-Alpes-Côte d'Azur
- Marseille
- Université d'Aix-Marseille
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Bilcha</name><affiliation wicri:level="1"><nlm:affiliation>University of Gondar, College of Medicine and Health Sciences, Department of Dermatology and Venereology, Gondar, Ethiopia.</nlm:affiliation><country xml:lang="fr">Éthiopie</country><wicri:regionArea>University of Gondar, College of Medicine and Health Sciences, Department of Dermatology and Venereology, Gondar</wicri:regionArea><wicri:noRegion>Gondar</wicri:noRegion></affiliation></author><author><name sortKey="Shao, R" sort="Shao, R" uniqKey="Shao R" first="R" last="Shao">R. Shao</name><affiliation wicri:level="1"><nlm:affiliation>Department of Parasitology, School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane 4072, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Department of Parasitology, School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane 4072</wicri:regionArea><wicri:noRegion>Brisbane 4072</wicri:noRegion></affiliation></author><author><name sortKey="Pollack, R J" sort="Pollack, R J" uniqKey="Pollack R" first="R J" last="Pollack">R J Pollack</name><affiliation wicri:level="2"><nlm:affiliation>IdentifyUS LLC, 320 Needham Street, Suite 200, Newton, MA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><placeName><region type="state">Massachusetts</region></placeName><wicri:cityArea>IdentifyUS LLC, 320 Needham Street, Suite 200, Newton</wicri:cityArea></affiliation></author><author><name sortKey="Barker, S C" sort="Barker, S C" uniqKey="Barker S" first="S C" last="Barker">S C Barker</name><affiliation wicri:level="1"><nlm:affiliation>Department of Parasitology, School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane 4072, Australia. s.barker@uq.edu.au.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Department of Parasitology, School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane 4072</wicri:regionArea><wicri:noRegion>Brisbane 4072</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2014">2014</date><idno type="RBID">pubmed:26309307</idno><idno type="pmid">26309307</idno><idno type="doi">10.1603/ME14001</idno><idno type="wicri:Area/PubMed/Corpus">003270</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">003270</idno><idno type="wicri:Area/PubMed/Curation">003160</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">003160</idno><idno type="wicri:Area/PubMed/Checkpoint">003160</idno><idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">003160</idno><idno type="wicri:Area/Ncbi/Merge">002984</idno><idno type="wicri:Area/Ncbi/Curation">002984</idno><idno type="wicri:Area/Ncbi/Checkpoint">002984</idno><idno type="wicri:doubleKey">0022-2585:2014:Xiong H:snps:in:entire</idno><idno type="wicri:Area/Main/Merge">003540</idno><idno type="wicri:Area/Main/Curation">003524</idno><idno type="wicri:Area/Main/Exploration">003524</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">SNPs in Entire Mitochondrial Genome Sequences (≈15.4 kb) and cox1 Sequences (≈486 bp) Resolve Body and Head Lice From Doubly Infected People From Ethiopia, China, Nepal, and Iran But Not France.</title><author><name sortKey="Xiong, H" sort="Xiong, H" uniqKey="Xiong H" first="H" last="Xiong">H. Xiong</name><affiliation wicri:level="1"><nlm:affiliation>Department of Parasitology, School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane 4072, Australia. These author contributed equally.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Department of Parasitology, School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane 4072</wicri:regionArea><wicri:noRegion>Brisbane 4072</wicri:noRegion></affiliation></author><author><name sortKey="Campelo, D" sort="Campelo, D" uniqKey="Campelo D" first="D" last="Campelo">D. Campelo</name><affiliation wicri:level="1"><nlm:affiliation>Department of Parasitology, School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane 4072, Australia. These author contributed equally.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Department of Parasitology, School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane 4072</wicri:regionArea><wicri:noRegion>Brisbane 4072</wicri:noRegion></affiliation></author><author><name sortKey="Boutellis, A" sort="Boutellis, A" uniqKey="Boutellis A" first="A" last="Boutellis">A. Boutellis</name><affiliation wicri:level="4"><nlm:affiliation>Unité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes (URMITE), UMR CNRS 6236 IRD 198, Faculté de Médecine, Méditerranée Infection, Aix-Marseille Université, Marseille, France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>Unité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes (URMITE), UMR CNRS 6236 IRD 198, Faculté de Médecine, Méditerranée Infection, Aix-Marseille Université, Marseille</wicri:regionArea><placeName><region type="region">Provence-Alpes-Côte d'Azur</region><region type="old region">Provence-Alpes-Côte d'Azur</region><settlement type="city">Marseille</settlement><settlement type="city">Marseille</settlement></placeName><orgName type="university">Université d'Aix-Marseille</orgName></affiliation></author><author><name sortKey="Raoult, D" sort="Raoult, D" uniqKey="Raoult D" first="D" last="Raoult">D. Raoult</name><affiliation wicri:level="4"><nlm:affiliation>Unité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes (URMITE), UMR CNRS 6236 IRD 198, Faculté de Médecine, Méditerranée Infection, Aix-Marseille Université, Marseille, France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>Unité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes (URMITE), UMR CNRS 6236 IRD 198, Faculté de Médecine, Méditerranée Infection, Aix-Marseille Université, Marseille</wicri:regionArea><placeName><region type="region">Provence-Alpes-Côte d'Azur</region><region type="old region">Provence-Alpes-Côte d'Azur</region><settlement type="city">Marseille</settlement><settlement type="city">Marseille</settlement></placeName><orgName type="university">Université d'Aix-Marseille</orgName></affiliation></author><author><name sortKey="Alem, M" sort="Alem, M" uniqKey="Alem M" first="M" last="Alem">M. Alem</name><affiliation wicri:level="1"><nlm:affiliation>University of Gondar, College of Medicine and Health Sciences, Department of Immunology and Molecular Biology, Gondar, Ethiopia.</nlm:affiliation><country xml:lang="fr">Éthiopie</country><wicri:regionArea>University of Gondar, College of Medicine and Health Sciences, Department of Immunology and Molecular Biology, Gondar</wicri:regionArea><wicri:noRegion>Gondar</wicri:noRegion></affiliation></author><author><name sortKey="Ali, J" sort="Ali, J" uniqKey="Ali J" first="J" last="Ali">J. Ali</name><affiliation wicri:level="1"><nlm:affiliation>University of Gondar, College of Medicine and Health Sciences, Department of Microbiology and Parasitology, Gondar, Ethiopia.</nlm:affiliation><country xml:lang="fr">Éthiopie</country><wicri:regionArea>University of Gondar, College of Medicine and Health Sciences, Department of Microbiology and Parasitology, Gondar</wicri:regionArea><wicri:noRegion>Gondar</wicri:noRegion></affiliation></author><author><name sortKey="Bilcha, K" sort="Bilcha, K" uniqKey="Bilcha K" first="K" last="Bilcha">K. Bilcha</name><affiliation wicri:level="1"><nlm:affiliation>University of Gondar, College of Medicine and Health Sciences, Department of Dermatology and Venereology, Gondar, Ethiopia.</nlm:affiliation><country xml:lang="fr">Éthiopie</country><wicri:regionArea>University of Gondar, College of Medicine and Health Sciences, Department of Dermatology and Venereology, Gondar</wicri:regionArea><wicri:noRegion>Gondar</wicri:noRegion></affiliation></author><author><name sortKey="Shao, R" sort="Shao, R" uniqKey="Shao R" first="R" last="Shao">R. Shao</name><affiliation wicri:level="1"><nlm:affiliation>Department of Parasitology, School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane 4072, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Department of Parasitology, School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane 4072</wicri:regionArea><wicri:noRegion>Brisbane 4072</wicri:noRegion></affiliation></author><author><name sortKey="Pollack, R J" sort="Pollack, R J" uniqKey="Pollack R" first="R J" last="Pollack">R J Pollack</name><affiliation wicri:level="2"><nlm:affiliation>IdentifyUS LLC, 320 Needham Street, Suite 200, Newton, MA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><placeName><region type="state">Massachusetts</region></placeName><wicri:cityArea>IdentifyUS LLC, 320 Needham Street, Suite 200, Newton</wicri:cityArea></affiliation></author><author><name sortKey="Barker, S C" sort="Barker, S C" uniqKey="Barker S" first="S C" last="Barker">S C Barker</name><affiliation wicri:level="1"><nlm:affiliation>Department of Parasitology, School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane 4072, Australia. s.barker@uq.edu.au.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Department of Parasitology, School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane 4072</wicri:regionArea><wicri:noRegion>Brisbane 4072</wicri:noRegion></affiliation></author></analytic><series><title level="j">Journal of medical entomology</title><idno type="ISSN">0022-2585</idno><imprint><date when="2014" type="published">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals</term><term>Asia</term><term>Ethiopia</term><term>France</term><term>Genome, Mitochondrial</term><term>Humans</term><term>Pediculus (genetics)</term><term>Polymorphism, Single Nucleotide</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Animaux</term><term>Asie</term><term>France</term><term>Génome mitochondrial</term><term>Humains</term><term>Pediculus (génétique)</term><term>Polymorphisme de nucléotide simple</term><term>Éthiopie</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Pediculus</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Pediculus</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Animals</term><term>Asia</term><term>Ethiopia</term><term>France</term><term>Genome, Mitochondrial</term><term>Humans</term><term>Polymorphism, Single Nucleotide</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Animaux</term><term>Asie</term><term>France</term><term>Génome mitochondrial</term><term>Humains</term><term>Polymorphisme de nucléotide simple</term><term>Éthiopie</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Some people host lice on the clothing as well as the head. Whether body lice and head lice are distinct species or merely variants of the same species remains contentious. We sought to ascertain the extent to which lice from these different habitats might interbreed on doubly infected people by comparing their entire mitochondrial genome sequences. Toward this end, we analyzed two sets of published genetic data from double-infections of body lice and head lice: 1) entire mitochondrial coding regions (≈15.4 kb) from body lice and head lice from seven doubly infected people from Ethiopia, China, and France; and 2) part of the cox1 gene (≈486 bp) from body lice and head lice from a further nine doubly infected people from China, Nepal, and Iran. These mitochondrial data, from 65 lice, revealed extraordinary variation in the number of single nucleotide polymorphisms between the individual body lice and individual head lice of double-infections: from 1.096 kb of 15.4 kb (7.6%) to 2 bps of 15.4 kb (0.01%). We detected coinfections of lice of Clades A and C on the scalp hair of three of the eight people from Nepal: one person of the two people from Kathmandu and two of the six people from Pokhara. Lice of Clades A and B coinfected the scalp hair of one person from Atherton, Far North Queensland, Australia. These findings argue for additional large-scale studies of the body lice and head lice of double-infected people.</div></front></TEI><affiliations><list><country><li>Australie</li><li>France</li><li>États-Unis</li><li>Éthiopie</li></country><region><li>Massachusetts</li><li>Provence-Alpes-Côte d'Azur</li></region><settlement><li>Marseille</li></settlement><orgName><li>Université d'Aix-Marseille</li></orgName></list><tree><country name="Australie"><noRegion><name sortKey="Xiong, H" sort="Xiong, H" uniqKey="Xiong H" first="H" last="Xiong">H. Xiong</name></noRegion><name sortKey="Barker, S C" sort="Barker, S C" uniqKey="Barker S" first="S C" last="Barker">S C Barker</name><name sortKey="Campelo, D" sort="Campelo, D" uniqKey="Campelo D" first="D" last="Campelo">D. Campelo</name><name sortKey="Shao, R" sort="Shao, R" uniqKey="Shao R" first="R" last="Shao">R. Shao</name></country><country name="France"><region name="Provence-Alpes-Côte d'Azur"><name sortKey="Boutellis, A" sort="Boutellis, A" uniqKey="Boutellis A" first="A" last="Boutellis">A. Boutellis</name></region><name sortKey="Raoult, D" sort="Raoult, D" uniqKey="Raoult D" first="D" last="Raoult">D. Raoult</name></country><country name="Éthiopie"><noRegion><name sortKey="Alem, M" sort="Alem, M" uniqKey="Alem M" first="M" last="Alem">M. Alem</name></noRegion><name sortKey="Ali, J" sort="Ali, J" uniqKey="Ali J" first="J" last="Ali">J. Ali</name><name sortKey="Bilcha, K" sort="Bilcha, K" uniqKey="Bilcha K" first="K" last="Bilcha">K. Bilcha</name></country><country name="États-Unis"><region name="Massachusetts"><name sortKey="Pollack, R J" sort="Pollack, R J" uniqKey="Pollack R" first="R J" last="Pollack">R J Pollack</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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